romagnolid

Bioinformaticians, PhD in Genome Biology

Prato, Italy

Pinned Repositories

ddSeeker
A tool for processing Bio-Rad ddSEQ single cell RNA-seq data
Language:Python4 4 63
PAMES
Tool to estimate purity of tumor samples exploiting DNA Methylation data
Language:R10 5 108
PAMESdata
Precomputed informative CpG sites and CpG islands to be used with PAMES package
Language:R0 3 02
Rockermeth
A tool for discovering Differentially Methylated Regions
Language:R4 4 42
combact
Pipeline to highlight genomic mutations in bacterial genomes
Language:Python2 2 00
dotfiles
Configuration files for various programs
Language:Shell00
ggpol
🌍 Parliament diagrams and more for ggplot2
Language:R0 1 00
ggpubr
'ggplot2' Based Publication Ready Plots
Language:R0 1 01
ggtree
:christmas_tree:Visualization and annotation of phylogenetic trees
Language:R0 1 00

romagnolid's Repositories

romagnolid/combact
Pipeline to highlight genomic mutations in bacterial genomes
Language:Python2 2 00
romagnolid/dotfiles
Configuration files for various programs
Language:Shell00
romagnolid/ggpol
🌍 Parliament diagrams and more for ggplot2
Language:R0 1 00
romagnolid/ggpubr
'ggplot2' Based Publication Ready Plots
Language:R0 1 01
romagnolid/ggtree
:christmas_tree:Visualization and annotation of phylogenetic trees
Language:R0 1 00
romagnolid/RadAR
A tool to perform comprehensive analysis of high-dimensional radiomic datasets
Language:R1 0
romagnolid/SigMA
Mutational signature analysis for low statistics SNV data
Language:R1 0
romagnolid/TCGAbiolinks
TCGAbiolinks
Language:R1 0
romagnolid/tmux-pain-control
standard pane key-bindings for tmux
Language:Shell1 0
romagnolid/tmux-sensible
basic tmux settings everyone can agree on
Language:Shell1 0