Can't load any files into Cerebro app

[irmed]

Hi!

I installed Cerebro docker, but when I try to load CRB files from examples folder, I get the error:
unknown input format

I tried to load both pbmc for Seurat 2 and 3 and other RDS and other generated CRB files, but still get the same error.

Could you, please, help with this?

[romanhaa]

Thanks for trying Cerebro. To resolve your issue, I need a few more details. I just tested the Docker container and for me it works with the examples files from the GitHub repo. Here is the command I ran to launch Cerebro from the Docker container:

docker run -p 8080:8080 -v ~/Desktop:/plots romanhaa/cerebro

I went to the address written in the terminal (0.0.0.0:8080) and could load the pbmc_10k.crb file without problems.

[irmed]

Thank you for your reply!
Yes, I run axectly the same.
I finally was able to convert my data into *.crb and to load it and it worked great, thanks!
But pre-calculated files on PBMC from here: https://github.com/romanhaa/Cerebro/tree/master/examples/pbmc_10k_v3
still does not work.

[romanhaa]

Glad to hear you were able to fix the issue. Yet I'm unable to reproduce that problem. I downloaded the files fresh from the repo and they load fine. Are you sure they were downloaded correctly?

[irmed]

I downloaded directly from the page and it worked. Thank you!