romanhaa/cerebroPrepare

Issues

• Problem with getMostExpressedGenes

  #15 opened 5 years ago by vondoRishi
  4

• Load .crb file into R

  #16 opened 5 years ago by davisidarta
  1

• Can't load any files into Cerebro app

  #13 opened 5 years ago by irmed
  4

• Allow to provide custom marker gene table for `getEnrichedPathways()`

  #12 opened 6 years ago by romanhaa
  0

• Update readme with getEnrichedPathways

  #11 opened 6 years ago by rpolicastro
  1

• Error with arguments in getMarkerGenes

  #9 opened 6 years ago by rpolicastro
  3

• Error when running addPercentMtRibo

  #10 opened 6 years ago by rpolicastro
  0

• Check if parameters are NULL and complain if they are.

  #8 opened 6 years ago by romanhaa
  0

• Export version of Seurat package.

  #7 opened 6 years ago by romanhaa
  0

• Get MT and ribo gene lists from biomaRt?

  #6 opened 6 years ago by romanhaa
  0

• Calculate nUMI and nGene if not present.

  #5 opened 6 years ago by romanhaa
  0

• Make compatible with Seurat v3.

  #4 opened 6 years ago by romanhaa
  0

• Store and export analysis parameters.

  #2 opened 6 years ago by romanhaa
  0

• Save data in `@misc$cerebro` instead of `@misc`.

  #3 opened 6 years ago by romanhaa
  0

• Add MSigDB hallmark lists to be tested in pathway enrichment.

  #1 opened 6 years ago by romanhaa
  0