Pinned Repositories
AdaptiveCalibrationOfMAPQScoresUsingMachineLearningTechniquesCode
Improving MapQ score code (with ex: 150 bp Illumina Reads)
battleShip
mini single player battleShip simulator using R.
battlesnake-python
A Simple BattleSnake AI Written in Python
CalcExpOffSpring
Easy Rosalind Question
CalculatingProteinMassfromAminoAcids
Using a dictionary, calc protein mass from A.A.
catBreedCNNTool
For a fun project I gathered a few thousand cat pictures, sorted them by breed and created a model which predicts a cats breed based on a picture. Using the top guess alone, it achieves over 93% accuracy at the present time, from 58 cat breeds. With a friend I plan on making an app and website for it.
emeraldTool
Gem3 + ML with UI
hiddenMarkovChain
Had done this exact exercise for a class long ago, just redid it again for practice.
monteCarloTest
LastMinutePracticeWithMonteCarlo
SmithWatermanAlgo
Sample Smith Waterman Algorithm coded for a class assignment
roushrsh's Repositories
roushrsh/AdaptiveCalibrationOfMAPQScoresUsingMachineLearningTechniquesCode
Improving MapQ score code (with ex: 150 bp Illumina Reads)
roushrsh/battleShip
mini single player battleShip simulator using R.
roushrsh/CalcExpOffSpring
Easy Rosalind Question
roushrsh/catBreedCNNTool
For a fun project I gathered a few thousand cat pictures, sorted them by breed and created a model which predicts a cats breed based on a picture. Using the top guess alone, it achieves over 93% accuracy at the present time, from 58 cat breeds. With a friend I plan on making an app and website for it.
roushrsh/emeraldTool
Gem3 + ML with UI
roushrsh/hiddenMarkovChain
Had done this exact exercise for a class long ago, just redid it again for practice.
roushrsh/monteCarloTest
LastMinutePracticeWithMonteCarlo
roushrsh/SmithWatermanAlgo
Sample Smith Waterman Algorithm coded for a class assignment
roushrsh/CheckNumberOfSquaresWhichAddUpToANumber
facebook2011HackerCupQualificationRoundCodingChallenge
roushrsh/EnumeratingGeneOrders
Give number of permutations given number. Rosalind problem.
roushrsh/fastai-v3
Starter app for fastai v3 model deployment on Render
roushrsh/FindingAProteinMotif
fetchN-GlycMotif. Rosalind Problem. Pretty Simple.
roushrsh/findingASplicedMotif
easyRosalindQuestion of finding a spliced Motif
roushrsh/Human-Protein-Atlas-Image-Classification
Kaggle Competition to classify images and their components using CNN
roushrsh/Inferring-mRNA-from-Protein-Rosalind
Inferring mRNA from Protein. Easy.
roushrsh/IntroToRandomStringsRosalind
# http://rosalind.info/problems/prob/ Simple
roushrsh/KaggleTitanic
Titanic Kaggle Challenge
roushrsh/MicrosoftMalwarePrediction
KaggleCompetition
roushrsh/MITDeepLearning6.S191
roushrsh/mortalWabbitz
Fibonnaci rabbits, mortal, dynamic, python, rosalind
roushrsh/OldJavaCCplusplusAndASMCode
roushrsh/OldUvicC-Ass1
For a second year software engineering course. Professor provided tests and what the outputs should be, and we had to create the files that did it.
roushrsh/openReadingFramesinCSharp
Decided to do the Rosalind Open Reading Frames problem in C#. I was looking to learn C# for future work and this seemed to be a good way to start. Previous OOP from Java helped even if it has been ages. Would've been much faster in python, but I really do enjoy the stability and checking that comes with OOP.
roushrsh/parsingTextTogetherFromPieces
FibonnaciPuzzle.Re-CreatingPageFromPieces
roushrsh/predictingMoleculePropertiesUsingML
Small Kaggle competition I did. I'm including some scripts I wrote which improved my final score.
roushrsh/RNASplicing
For fun quickly did the Rosalind Assignment as seen here: http://rosalind.info/problems/splc/
roushrsh/Shortest-gene-to-fasta-BASH
From a .gene file, it finds the shortests gene, prints to a .txt file for the user. Then searches through a corresponding fasta file to find the sequence of the gene and prints that sequence to its own Fasta file.
roushrsh/SimpleAddBinariesOutPutAsBinaryTool
Adds two binaries (base 2) together and outputs the result
roushrsh/TransitionTransversionRatio
#http://rosalind.info/problems/tran/ Easy Calc number of Tran/Trans
roushrsh/UIExample