rsharris

Pinned Repositories

DiscoverY
K-mer based classifier for Y-contig identification from Whole Genome Assemblies
Language:Jupyter Notebook0 1 00
echydna
Python management of random DNA strings
Language:Python0 1 01
fake_reads_2021
0 1 00
genodsp
General workbench for processing signals along genomic (chromosomal) intervals
Language:C1 1 00
HowDeSBT-multi_make_bf
Sequence Bloom Tree, supporting determined/how split filters
Language:C++0 0 00
jun2015lgl
Support scripts for "Evidence for Retrovirus Expression in LGL Leukemia"
Language:Python1 1 00
kmervature
Model fitting to kmer abundance histograms
Language:Python0 3 00
sdsl-lite
Succinct Data Structure Library 2.0
Language:C++0 1 00
suffynx
Support scripts for "Retrovirus insertion site analysis of LGL leukemia patient genomes"
Language:Python0 2 10
sdsl-lite
Succinct Data Structure Library 2.0
Language:C++2.2k 119 199349

rsharris's Repositories

rsharris/genodsp
General workbench for processing signals along genomic (chromosomal) intervals
Language:C1 1 00
rsharris/jun2015lgl
Support scripts for "Evidence for Retrovirus Expression in LGL Leukemia"
Language:Python1 1 00
rsharris/DiscoverY
K-mer based classifier for Y-contig identification from Whole Genome Assemblies
Language:Jupyter Notebook0 1 00
rsharris/echydna
Python management of random DNA strings
Language:Python0 1 01
rsharris/fake_reads_2021
0 1 00
rsharris/HowDeSBT-multi_make_bf
Sequence Bloom Tree, supporting determined/how split filters
Language:C++0 0 00
rsharris/kmervature
Model fitting to kmer abundance histograms
Language:Python0 3 00
rsharris/sdsl-lite
Succinct Data Structure Library 2.0
Language:C++0 1 00
rsharris/suffynx
Support scripts for "Retrovirus insertion site analysis of LGL leukemia patient genomes"
Language:Python0 2 10