Pinned Repositories
AceGWT
Integrating the Ace Editor with GWT
assembly_api
Data API for Assembly Object
AssemblyUtil
Set of KBase functions for interacting with Assemblies and ContigSets using the KBase data_api
auth
authentication services for kbase
AWE
workflow and resource management system for bioinformatics data analysis
catalog
A dynamic catalog of KBase functionality that can also build/deploy modules automatically
contigcount
Example repository created with kb_sdk.
ContigFilterJava
ContigFilterPerl
ContigFilterPython
rsutormin's Repositories
rsutormin/assembly_api
Data API for Assembly Object
rsutormin/DomainAnnotation
SDK port of KBase GeneFamilies service
rsutormin/gaprice_convert_assy_file_to_contigs
Convert a KBaseFile.AssemblyFile to a KBaseGenome.ContigSet
rsutormin/GeneOntologyDecorator
rsutormin/genome_annotation_api
Data API for Genome Annotation Objects
rsutormin/GenomeProteomeComparison
rsutormin/HTMLFileSetServ
Dynamic HTTP service that serves up the contents of HTMLFileSets.
rsutormin/kb_blast
BLAST+ implementation for KBase
rsutormin/kb_cutadapt
KBase wrapper for the cutadapt tool
rsutormin/kb_fastqc
rsutormin/kb_megahit
KBase module for running the MEGAHIT assembler
rsutormin/kb_phylogenomics
rsutormin/kb_PRINSEQ
KBase SDK wrapping of PRINSEQ (specifically for the low complexity filtering)
rsutormin/kb_quast
KBase wrapper for the QUAST assembly quality assessment tool.
rsutormin/kb_sdk
rsutormin/kb_SPAdes
SPAdes wrapper
rsutormin/kb_trimmomatic
rsutormin/KBaseKnowledgeEngine
rsutormin/KBaseRelationEngine
rsutormin/KEConnectorGenomeHomology
rsutormin/narrative
rsutormin/NarrativeService
rsutormin/NarrativeViewers
rsutormin/njs_wrapper
Service for wrapping Narrative Job Service with additional functionality
rsutormin/PangenomeFileUtilImpl
rsutormin/PangenomeOrthomcl
rsutormin/ProkkaAnnotation
rsutormin/service_wizard
KBase Service Wizard to manage dynamic services
rsutormin/SpeciesTreeBuilder
rsutormin/workspace_deluxe
The Workspace Service (WSS) is primarily a language independent remote storage and retrieval system for KBase typed objects (TO) defined with the KBase Interface Description Language (KIDL).