Pinned Repositories
MorphOT
Transport-based interpolation of cryo-EM density maps for ChimeraX
Homotopy
Homotopy theory in Coq.
litefarm
ribosome.xyz-backend
ribosome.xyz-frontend.ts
Fronted for the ribosome.xyz knowledgebase.
riboxyz
sb-python-kfk
xv6-riscv
Xv6 for RISC-V
rtviii's Repositories
rtviii/litefarm
rtviii/dotfiles
rtviii/riboxyz
rtviii/xv6-riscv
Xv6 for RISC-V
rtviii/addreth
🔖 A better way to display Ethereum addresses for React.
rtviii/bio-diffusion
A geometry-complete diffusion generative model (GCDM) for 3D molecule generation and optimization (Nature CommsChem)
rtviii/books
rtviii/cctbx_project
Computational Crystallography Toolbox
rtviii/chai-lab
Chai-1, SOTA model for biomolecular structure prediction
rtviii/chimerax_bundle_test
rtviii/cv_shadcn
Print-friendly, minimalist CV page
rtviii/datafusion
Apache DataFusion SQL Query Engine
rtviii/ete
Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.
rtviii/fibsem
A universal API for FIBSEM control
rtviii/gmx_test
rtviii/meshing
First stabs at meshing molecular surfaces
rtviii/molrender
Create macromolecular images
rtviii/molstar-prototypes
rtviii/molstar_docs
rtviii/open3d_mesh
rtviii/Papers-atomic-model-building-in-CryoEM-maps
This repository lists the state-of-the-arts methods by using machine and deep learning for protein atomic model building from cryoEM density maps.
rtviii/pcl_octree_mesh_tunnel
rtviii/pyhmmer
Cython bindings and Python interface to HMMER3.
rtviii/pytom-match-pick
GPU-accelerated template matching for cryo-ET
rtviii/qrt
rtviii/ribxz_fend_components_v0
rtviii/ribxz_fend_v1
[WIP] next.js implementation of ribosome.xyz frontend
rtviii/rtviii
rtviii/rtviii.github.io
rtviii/SerialFIB
A Modular Platform for Streamlining Automated Cryo-FIB Workflows