Pinned Repositories
2016BCB568
affine-gap-gotoh
This is a c++ implementation of pairwise alignment affine gap Gotch algorithm
ASmethodsBenchmarking
Simulated RNAseq data for assessment of differential splicing detection methods.
bedtools2
A powerful toolset for genome arithmetic.
bwa
Burrow-Wheeler Aligner for pairwise alignment between DNA sequences
classic
fgbio
Tools for working with genomic and high throughput sequencing data.
IRLS
C++ implementation of IRLS algorithm for generalized linear model
strawberry
A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)
WaspsProject
ruolin's Repositories
ruolin/strawberry
A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)
ruolin/ASmethodsBenchmarking
Simulated RNAseq data for assessment of differential splicing detection methods.
ruolin/WaspsProject
ruolin/2016BCB568
ruolin/affine-gap-gotoh
This is a c++ implementation of pairwise alignment affine gap Gotch algorithm
ruolin/bedtools2
A powerful toolset for genome arithmetic.
ruolin/bwa
Burrow-Wheeler Aligner for pairwise alignment between DNA sequences
ruolin/classic
ruolin/fgbio
Tools for working with genomic and high throughput sequencing data.
ruolin/IRLS
C++ implementation of IRLS algorithm for generalized linear model
ruolin/math
Stan Math Library
ruolin/raspberry
RNA-Seq differential spliced transcripts toolkit
ruolin/ruolin.github.io
Ruolin Liu's personal website
ruolin/seqan
SeqAn's official repository.
ruolin/SeqLib
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
ruolin/sga
de novo sequence assembler using string graphs
ruolin/strawberry_comp
ruolin/TCGA_AB_Compartments
A/B compartments for 12 cancer types estimated from TCGA methylation data
ruolin/vg
tools for working with genome variation graphs
ruolin/vim