Pinned Repositories
Ancestry_HMM
artic-ncov2019
ARTIC nanopore protocol for nCoV2019 novel coronavirus
bioconda-recipes
Conda recipes for the bioconda channel.
comp-pop-gen
Automatic pipeline to go from SRA to vcfs
Heterozygosity_HMM
MAP_SD
proximity_ligation_inversion_mapping
SELAM
Simulation of Epistasis Local adaptation, with Ancestry and Mate choice
USHER_DEMO
vcf2MK
russcd's Repositories
russcd/Ancestry_HMM
russcd/SELAM
Simulation of Epistasis Local adaptation, with Ancestry and Mate choice
russcd/vcf2MK
russcd/USHER_DEMO
russcd/MAP_SD
russcd/Heterozygosity_HMM
russcd/proximity_ligation_inversion_mapping
russcd/artic-ncov2019
ARTIC nanopore protocol for nCoV2019 novel coronavirus
russcd/bioconda-recipes
Conda recipes for the bioconda channel.
russcd/comp-pop-gen
Automatic pipeline to go from SRA to vcfs
russcd/comp_pop_gen_pipeline_development
russcd/ConstantMarginalIterator
A class for iterating all non-negative integer valued matrices with fixed, given marginals.
russcd/gene_family_evolution
russcd/Int-HMM
russcd/linked-selection
russcd/parsimony
russcd/Phylogenomic
russcd/sarscov2phylo
Global phylogenies of SARS-CoV-2 sequences
russcd/strain_phylogenetics
russcd/systematic_error_workflow_example
russcd/tree_files
hosting tree files for ease
russcd/usher
Ultrafast Sample Placement on Existing Trees
russcd/VGsim
VGsim is a fast and scalable simulator of viral genealogies during global pandemic.
russcd/wtdbg2
A fuzzy Bruijn graph approach to long noisy reads assembly