rvolden

Bioinformatics PhD student at UCSC

Pinned Repositories

10xR2C2
Scripts for analyzing 10x R2C2 data
Language:Python6 2 76
C3POa
Computational pipeline for calling consensi on R2C2 nanopore data
Language:Python30 6 2116
conk
Cython Smith-Waterman aligner for C3POa
Language:Python0 1 01
dotfiles
Language:Vim Script0 1 00
emtrey
SAM to PSL converter
Language:Go2 1 01
gonk
R2C2/C3POa Smith-Waterman aligner that outputs a list of summed scores
Language:Go1 2 10
grub2-themes
Modern Design theme for Grub2
Language:Shell0 0 00
Mandalorion
Pipeline to identify isoforms from full-length cDNA sequencing data
Language:Python6 1 57
Mandalorion-Episode-II
Version II of Mandalorion
Language:Python32 4 72
Mandalorion-Episode-III
Revenge of the isoforms
Language:Python4 0 00

rvolden's Repositories

rvolden/Mandalorion-Episode-II
Version II of Mandalorion
Language:Python32 4 72
rvolden/C3POa
Computational pipeline for calling consensi on R2C2 nanopore data
Language:Python30 6 2116
rvolden/10xR2C2
Scripts for analyzing 10x R2C2 data
Language:Python6 2 76
rvolden/Mandalorion
Pipeline to identify isoforms from full-length cDNA sequencing data
Language:Python6 1 57
rvolden/Mandalorion-Episode-III
Revenge of the isoforms
Language:Python4 0 00
rvolden/emtrey
SAM to PSL converter
Language:Go2 1 01
rvolden/gonk
R2C2/C3POa Smith-Waterman aligner that outputs a list of summed scores
Language:Go1 2 10
rvolden/conk
Cython Smith-Waterman aligner for C3POa
Language:Python0 1 01
rvolden/dotfiles
Language:Vim Script0 1 00
rvolden/grub2-themes
Modern Design theme for Grub2
Language:Shell0 0 00
rvolden/LR-splitpipe
Demultiplexing and debarcoding tool designed for LR-Split-seq data.
Language:Python0 0
rvolden/qmk_firmware
Open-source keyboard firmware for Atmel AVR and Arm USB families
Language:C0 0
rvolden/Rosalind
Using golang to solve Rosalind problems no matter how badly implemented
Language:Go