Pinned Repositories
ABCadmix_dev
assort-mate
Estimate the strength of assortative mating
call-polyploids
simulating and modeling polyploid genotypes
chum_populations
process RADseq data from chum populations
lai-sim
LDadmix
popgen2017-pink_salmon
Exercise - Estimation of effective population size in pink salmon
rwaples's Repositories
rwaples/lai-sim
rwaples/popgen2017-pink_salmon
Exercise - Estimation of effective population size in pink salmon
rwaples/LDadmix
rwaples/chum_populations
process RADseq data from chum populations
rwaples/ABCadmix_dev
rwaples/assort-mate
Estimate the strength of assortative mating
rwaples/call-polyploids
simulating and modeling polyploid genotypes
rwaples/call_paralogs
sketch of genotype calls for paralogs
rwaples/chinook_gsi_example
learning how to use gsi_sim
rwaples/Copenhagen
PhD course in analyses of genotyping and next-generation sequencing data in medical and population genetics 2015/2016
rwaples/example_dosage_r2
rwaples/freqfree_suppl
rwaples/LDadmix_demo
first pass at a workable version LDadmix
rwaples/lowdepthLD
rwaples/make_pedigree_example
rwaples/ml-psv
ML classification of duplicated loci
rwaples/popgen2018-pink_salmon
Exercise - Estimation of effective population size in pink salmon
rwaples/PWOP-vs-SA
comparing two methods of Ne estimation
rwaples/RAD_allele_depth
rwaples/resampling
rwaples/rwaples.github.io
Personal website for Ryan Waples
rwaples/simNe
old code for simulation and analysis of pseudo-replication between linked loci
rwaples/stdpopsim
A library of standard population genetic models
rwaples/theWeights-examples
Example code implementing the parental weighting scheme outlined the manuscript "TheWeight: A simple and flexible algorithm for simulating non-ideal populations"