Pinned Repositories
AI-For-Beginners
12 Weeks, 24 Lessons, AI for All!
alphafold
Open source code for AlphaFold.
alu-detect
aludetect
AluMine
Scripts for discovery and genotyping polymorphic Alu element insertions in human genomes
bedops
:microscope: BEDOPS: high-performance genomic feature operations
chip-seq-pipeline2
ENCODE ChIP-seq pipeline
ChIPseqSpikeInFree
A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications
deepTools
Tools to process and analyze deep sequencing data.
Hyper-editing
Hyper-editing
STAR
RNA-seq aligner
ryrl9703's Repositories
ryrl9703/chip-seq-pipeline2
ENCODE ChIP-seq pipeline
ryrl9703/Hyper-editing
Hyper-editing
ryrl9703/STAR
RNA-seq aligner
ryrl9703/AI-For-Beginners
12 Weeks, 24 Lessons, AI for All!
ryrl9703/alphafold
Open source code for AlphaFold.
ryrl9703/alu-detect
aludetect
ryrl9703/AluMine
Scripts for discovery and genotyping polymorphic Alu element insertions in human genomes
ryrl9703/bedops
:microscope: BEDOPS: high-performance genomic feature operations
ryrl9703/ChIPseqSpikeInFree
A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications
ryrl9703/deepTools
Tools to process and analyze deep sequencing data.
ryrl9703/deNovo-Detect
ryrl9703/fastp
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
ryrl9703/flowChart
ryrl9703/igv-webapp
IGV Web App
ryrl9703/JACUSA2helper
Auxiliary R package for assessment of JACUSA2 results
ryrl9703/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
ryrl9703/REDITs
RNA editing tests
ryrl9703/RNAEditingIndexer
A tool for the calculation of RNA-editing index for RNA seq data
ryrl9703/RNAEditor
ryrl9703/TRUST4
TCR and BCR assembly from RNA-seq data