/bench-marking-samplers-covid

Code from our covid19 model to be used for becnhmarking various samplers

Primary LanguageStanMIT LicenseMIT

bench-marking-samplers-covid

Code from our covid19 model to be used for benchmarking various samplers.

To run the code from terminal do following

cd gitrepo
# run europe script
Rscript src/base-europe.R -F
# run usa script
Rscript src/base-usa.R -F

To run the code from rstudio

# source europe script, make sure you make full true in options
source base-europe.R
# source usa script, make sure you make full true in options
source base-usa.R

Notice

⚠️ This code shouldn't be used for inferring any estimates. It is mainly for benchmarking purposes. For actual code look here

⚠️ This code is released with no support. We try our best to look at issues and pull request but can't help people with setup most of the time.

⚠️ This model is in active development and so parameter name and behaviours, and output file formats will change without notice.

⚠️ As with any mathematical model, it is easy to misconfigure inputs and therefore get meaningless outputs. The development team only endorses outputs it has itself generated.