Pinned Repositories
3DNAmethylation
custom scripts used to process and filter data for the 3DNA methylation project
4DN_JAWG_H1
5mC-H3K27me3
Custom scripts and Jupyter notebooks used to generate figures for the 5mC/H3K27me3 antagonism project
AstrobioMike.github.io
Site to help biologists wade their way into bioinformatics.
awesome-bioinformatics-jobs
Resources for bioinformatics jobs
BagOfTricks
A collection of python and bash scripts for various bioinformatics-related tasks
BI-BE-CS-183-2023
Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023
bioinf_tools
Bioinformatics Tools
bioinformatics-one-liners
Bioinformatics one liners from Ming Tang
book
sachingadakh's Repositories
sachingadakh/3DNAmethylation
custom scripts used to process and filter data for the 3DNA methylation project
sachingadakh/4DN_JAWG_H1
sachingadakh/5mC-H3K27me3
Custom scripts and Jupyter notebooks used to generate figures for the 5mC/H3K27me3 antagonism project
sachingadakh/AstrobioMike.github.io
Site to help biologists wade their way into bioinformatics.
sachingadakh/awesome-bioinformatics-jobs
Resources for bioinformatics jobs
sachingadakh/BagOfTricks
A collection of python and bash scripts for various bioinformatics-related tasks
sachingadakh/BI-BE-CS-183-2023
Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023
sachingadakh/bioinf_tools
Bioinformatics Tools
sachingadakh/bioinformatics-one-liners
Bioinformatics one liners from Ming Tang
sachingadakh/book
sachingadakh/computational_biology
course material
sachingadakh/CoVarPlot
CoVarPlot - Covarage Variant Plots for viral whole genome sequencing
sachingadakh/GPU-Bioinformatics
Listing of GPU based bioinformatics software & sites & publications
sachingadakh/Intro-to-R
sachingadakh/coding_exercise_TCGA_infiltration
coding exercise using TCGA immune infiltration data
sachingadakh/DataScience_Interactive_Python
Python interactive dashboards for learning data science
sachingadakh/FriendsDontLetFriends
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
sachingadakh/NanoCaller
Variant calling tool for long-read sequencing data
sachingadakh/NanoMethPhase
Methylation Phasing for Nanopore Sequencing
sachingadakh/Online_R_learning
Online R learning for applied statistics
sachingadakh/PC-Clocks
Code for the calculation and implementation of the PC Based epigenetic clocks
sachingadakh/princess
ONT-PACBIO:SVs
sachingadakh/Python_Tutorials
Python tutorials in both Jupyter Notebook and youtube format.
sachingadakh/PythonTUBS
Python introduction for life scientists
sachingadakh/r-pharma-2023-tidymodels
Introduction to machine learning with {tidymodels}
sachingadakh/sturgeon
Sturgeon is a CNS neural network classifier
sachingadakh/sturgeon_dev
sachingadakh/teaching
This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.
sachingadakh/XAI-for-bioinformatics
Explainable AI for Bioinformatics
sachingadakh/zuo_ncomms_2021
tad analysis