/CytoNorm_note

R code to demonstrate the functionalities of CytoNorm2.0

Primary LanguageR

CytoNorm note

R code to demonstrate the functionalities of CytoNorm2.0.

Demonstrated use cases

  • Normalize without using technical replicates or controls
  • Normalize towards another model, batch or goal distribution
  • Normalize markers without including them in the clustering step

Visualizations

  • Waterfall plot
  • FlowSOMmary
  • Splines
  • Densities

Data

The dataset that was used to show all functionalities is available on FlowRepository (ID: FR-FCM-Z6UT).