Pinned Repositories
adventofcode
beacon-go
AppEngine implementation of the Beacon API from the Global Alliance for Genomics and Health written in Go.
data-science-sequencing.github.io
Web site for the class EE 372 : Data Science for High-Throughput Sequencing at Stanford
deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
fhir
FHIR Protocol Buffers
gcp-deepvariant-runner
This repository contains a docker container that runs DeepVariant on the Google Cloud Platform.
gcp-deepvariant-runner-old
This repository contains a docker container that runs DeepVariant on the Google Cloud Platform.
gcp-synthea
A framework to run Synthea on GCP
persian-lexicon
A lexicon of 70K unique Persian (Farsi) words.
wordle-solver
A universal Wordle solver that works with any language
samanvp's Repositories
samanvp/persian-lexicon
A lexicon of 70K unique Persian (Farsi) words.
samanvp/wordle-solver
A universal Wordle solver that works with any language
samanvp/adventofcode
samanvp/beacon-go
AppEngine implementation of the Beacon API from the Global Alliance for Genomics and Health written in Go.
samanvp/data-science-sequencing.github.io
Web site for the class EE 372 : Data Science for High-Throughput Sequencing at Stanford
samanvp/deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
samanvp/fhir
FHIR Protocol Buffers
samanvp/gcp-deepvariant-runner
This repository contains a docker container that runs DeepVariant on the Google Cloud Platform.
samanvp/gcp-deepvariant-runner-old
This repository contains a docker container that runs DeepVariant on the Google Cloud Platform.
samanvp/gcp-synthea
A framework to run Synthea on GCP
samanvp/gcp-variant-transforms
GCP Variant Transforms
samanvp/gcp-variant-transforms-java
samanvp/moler_pagerank
Fast Personalized Pagerank Implementation (Moler PageRank)
samanvp/nucleus
Python and C++ code for reading and writing genomics data.
samanvp/pangeo
A place to discuss and track issues related to the Pangeo project
samanvp/pipelines-tools
Tools for developing and running pipelines with the Genomics API
samanvp/python-bigquery
samanvp/scalable_analytics
Public collaboration of Scalable Single Cell Analytics
samanvp/ssxcc
Sparse Set XCC Solver in Go based on Donald Knuth's Dancing Cells talk
samanvp/synthea
Synthetic Patient Population Simulator
samanvp/table-testing
requirements, examples, and tests for expression matrix file formats
samanvp/terraform-examples
Terraform Examples
samanvp/variant-annotation
Use cloud technology to annotate human sequence variants in parallel.
samanvp/variant-processing-in-BigQuery
Sample queries to highlight the benefits of storing genomic variants in BigQuery.