Pinned Repositories
2014-07-17-aspb
ASPB repository, July 2014
BiochemistryAPI
cobrakbase
KBase Interface for COBRApy
CompoundSetUtils
Evidenced_Based_Plant_Reconstructions
fba_tools
A suite of metabolic modeling tools created using the KBase SDK
FBAFileUtil
Functions for accessing and saving KBase FBA related data as files.
GenericsAPI
genome_annotation
The genome annotation service provides automated gene annotation based on the RAST system. This deploys both client and service components.
samseaver's Repositories
samseaver/BiochemistryAPI
samseaver/cobrakbase
KBase Interface for COBRApy
samseaver/CompoundSetUtils
samseaver/Evidenced_Based_Plant_Reconstructions
samseaver/fba_tools
A suite of metabolic modeling tools created using the KBase SDK
samseaver/GenericsAPI
samseaver/GenomeFileUtil_PhytozomeUpload
samseaver/jgi_data_portal_kbase
samseaver/kb_cobrapy
samseaver/kb_fastqc
samseaver/kb_pickaxe
samseaver/kb_plant_rast
samseaver/kb_sdk_docs
KBase SDK Documentation
samseaver/kb_uploadmethods
samseaver/KBaseReport
experiments with a report data type for the kbase sdk
samseaver/KBaseRNASeq
samseaver/ModelSEED-UI
ModelSEED UI (beta)
samseaver/ModelSEEDDatabase
This repository contains the definitive copy of the biochemistry and metadata used to construct models using the ModelSEED/ProbAnno approach
samseaver/ModelSEEDpy
Python package for building and analyzing models using ModelSEED
samseaver/narrative
samseaver/NUMonster
A tool for mining atomic coordinate data for macromolecular complexes in the RCSB Protein Data Bank
samseaver/phytozome_kbase_globus_transfer
Process of transferring plant genomes from JGI Phytozome to KBase Data Transfer Node
samseaver/Plant_Metabolomics_Chapter
samseaver/ProbModelSEED
samseaver/pygrace
A Python package for creating xmgrace files.
samseaver/RAST_SDK
samseaver/ReadsUtils
Functions for uploading and downloading KBase reads files.
samseaver/ReferenceDataManager
This SDK module contains functions related to the loading, updating, and management of reference data in KBase
samseaver/streamlined_workspace
simplified Makefile for workspace for deploying scripts on laptop
samseaver/tweets
janky twitter replacement.