sanger-bentley-group/gps-pipeline
Nextflow Pipeline for processing Streptococcus pneumoniae sequencing raw reads (FASTQ files) by the GPS Project (Global Pneumococcal Sequencing Project)
NextflowGPL-3.0
Issues
- 5
Shovill Appears to be Not Working
#113 opened by fugunokaraage - 22
Issue with running GPS pipeline
#108 opened by TNVN2022 - 1
Cannot download seroBA database
#95 opened by fugunokaraage - 3
suggestions to singularity preflight
#100 opened by Phuong-Le - 14
ERROR ~ Error executing process > 'PIPELINE:SEROTYPE (NP-0087-IDRL-AKU_S92_trimmed)'
#52 opened by Samiah-Kanwar - 0
Remove Nextflow workaround for Docker CPU Limit
#26 opened by HarryHung - 0
- 0
- 1
headers missing
#1 opened by kumarnaren