/CryoVIT

CryoVIT: Efficient Segmentation of Cryo-electron Tomograms with Vision Foundation Models

Primary LanguagePythonMIT LicenseMIT

CryoVIT: Efficient Segmentation of Cryo-electron Tomograms with Vision Foundation Models

Installation Instructions

CryoVIT uses Mamba to manage python packages and dependencies and can be downloaded here. You should also be able to use Conda instead of Mamba but setting up the environment may take an unreasonably long time.

  1. Clone the CryoVIT github repository: git clone https://github.com/sanketx/CryoVIT.git
  2. Setup the mamba environment: mamba env create -f CryoVIT/env.yml
  3. Activate the mamba environment: mamba activate cryovit_env