Various scripts and tools for handling genotype data. Currently these are written for the Airwave project: https://www.police-health.org.uk/
Just starting so things are messy and much to do. Clean up file names, create pipeline, etc. Mainly building a genotype QC pipeline.
Check Ruffus: http://www.ruffus.org.uk/
and CGAT: http://www.cgat.org/cgat/Tools/the-cgat-code-collection
Note that several scripts are borrowed (Anderson et al., 2010 QC paper for example).