sara-javadzadeh/FastViFi

Issues

• "run_kraken_vifi_pipeline.py" becomes a directory

  #16 opened 2 months ago by hiuchi
  4

• output interpretation HIV

  #15 opened 3 months ago by antoine4ucsd
  2

• [E::bwa_idx_load_from_disk] fail to locate the index files

  #14 opened 6 months ago by v-mukhina
  7

• error in run kraken_vifi_conainer.py using docker: subprocess.calledprocesserror returned non-zero exit status 1

  #13 opened 9 months ago by cubense
  8

• Failing to build custom database for HBV

  #9 opened a year ago by wskang1202
  18

• Error on test code (however, using singularity)

  #10 opened a year ago by gailrosen
  10

• kraken datasets unavailable

  #12 opened a year ago by ugh-astya
  12

• Use the whole exome sequencing?

  #8 opened a year ago by xiasijian
  7

• Do it support hg38 genome?

  #7 opened a year ago by xiasijian
  6

• human reference file not existent

  #6 opened 2 years ago by aflocon
  3

• chmod folder access error

  #5 opened 2 years ago by bhagesh-codebeast
  0

• ViFi vs FastVifi

  #4 opened 2 years ago by pintoa1-mskcc
  0

• How to select FASTAs for building new viral references?

  #3 opened 3 years ago by pintoa1-mskcc
  6

• ViFi pipeline has warning messages and test dataset can't generate expected results

  #2 opened 3 years ago by shengzhulst
  3

• The ViFi step 4|5 google link point to error

  #1 opened 3 years ago by shengzhulst
  2