/MOLSIM-2020

Repository for students enrolled in Molsim Winter 2020

Primary LanguageJupyter NotebookMIT LicenseMIT

Fundamentals of Molecular Simulation 2020

All details, homework, and lectures for Molecular Simulation class can be found in this Github repo.

Class

Wednesdays 9:30 am - 11:30 am

Room: MolES 115

Schedule and Syllabus

Week # Date Topic Instructor
Week #1 Jan 8th Introduction to Simulations Prof. Valleau 
Week #2 Jan 15th Github Sarah
Week #3 Jan 22nd Electronic Structure/Quantum Calculations Prof. Valleau
Week #4 Jan 29th Forcefields/Classical MD Chris
Week #5 Feb 5th Simulation Parameters (Thermostat/Barostats/Cutoffs)/Gromacs Xin
Week #6 Feb 12th VMD / Visualization Sarah
Week #7 Feb 19th Parallel Computing Chowdhury
Week #8 Feb 26th Trajectory Analysis (RDF/RMSD/Autocorrelation) Janani
Week #9 March 4th Final Projects Sarah
Week #10 March 11th Master Equations COVID-19

Final Projects due during Finals Week