saraharcos
Postdoctoral Fellow studying RNA virus evolution at the University of Michigan
Lauring LabNashville, TN
Pinned Repositories
CHIKV_UpSet
Files to use the online version of UpSet
CHIKV_VIRCLASP_Analysis
New analysis of CHIKV data after review. Removes medium confidence dataset and adds additional criteria for "binding proteins"
CLASP_IFN_Analysis
CLASP in U2OS cells, control or with IFN treatment
CodeClub_09122021
Lauring Lab Code Club: Shiny Apps
IAV_VIRCLASP_Analysis
Analysis of IAV VIR-CLASP data (limited conditions)
m6A_Exploratory
Re-analyzing published m6A-seq and PAR-CLIP data
r_fridays
Weekly meetings to solve common biochem/biology data analysis problems
rfridays_data_simulation
Simulating data for R fridays. Original datasets will not be posted, only code for simulation
saraharcos.github.io
Personal Website
VIR_CLASP-Analysis
Analysis of VIR-CLASP data
saraharcos's Repositories
saraharcos/m6A_Exploratory
Re-analyzing published m6A-seq and PAR-CLIP data
saraharcos/CHIKV_VIRCLASP_Analysis
New analysis of CHIKV data after review. Removes medium confidence dataset and adds additional criteria for "binding proteins"
saraharcos/VIR_CLASP-Analysis
Analysis of VIR-CLASP data
saraharcos/CHIKV_UpSet
Files to use the online version of UpSet
saraharcos/CLASP_IFN_Analysis
CLASP in U2OS cells, control or with IFN treatment
saraharcos/CodeClub_09122021
Lauring Lab Code Club: Shiny Apps
saraharcos/IAV_VIRCLASP_Analysis
Analysis of IAV VIR-CLASP data (limited conditions)
saraharcos/r_fridays
Weekly meetings to solve common biochem/biology data analysis problems
saraharcos/rfridays_data_simulation
Simulating data for R fridays. Original datasets will not be posted, only code for simulation
saraharcos/saraharcos.github.io
Personal Website
saraharcos/DANG_qPCR_example
An example qPCR dataset to use for plotting a standard curve and calculating qPCR efficiency
saraharcos/hello-world
first repository
saraharcos/ImmuneTargets_ELAVL1_2020
Overlap of PAR-CLIP, RIP-Seq, RNA-Seq and SLAM-Seq to discover the funcitonal targets of RBP ELAVL1 during an innate immune response
saraharcos/Lab-Scripts
Bench Automation
saraharcos/packages-report
saraharcos/PARCLIP_IDR
Adding IDR calculation to the PARpipe published by the Ohler lab: https://github.com/ohlerlab/PARpipe
saraharcos/PARcos
shiny app for exploring PAR-CLIP data
saraharcos/PARcos_dashboard
PARcos but the shiny dashboard version
saraharcos/un-report
Carpentries demo project
saraharcos/wtf-ascii-funtimes