Pinned Repositories
ComPath
A web application for exploring, analyzing, and curating pathway databases
drug2ways
A Python package for drug discovery by analyzing causal paths on multiscale networks
pathway-forte
A Python package for benchmarking pathway database with functional enrichment and classification methods
PathMe
Harmonizing pathway databases using Biological Expression Language (BEL)
DoctoralThesis
GSEApy
Gene Set Enrichment Analysis in Python
OpenBioLink
OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.
PathMe-Viewer
A web application for merging and exploring the mechanistic pathway knowledge
prophtools
ProphTools: Heterogeneous network prioritization tools
pybel
A pure Python package for parsing, validating, compiling, and converting biological knowledge graphs encoded in BEL
sarahbeenie's Repositories
sarahbeenie/DoctoralThesis
sarahbeenie/GSEApy
Gene Set Enrichment Analysis in Python
sarahbeenie/OpenBioLink
OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.
sarahbeenie/PathMe-Viewer
A web application for merging and exploring the mechanistic pathway knowledge
sarahbeenie/prophtools
ProphTools: Heterogeneous network prioritization tools
sarahbeenie/pybel
A pure Python package for parsing, validating, compiling, and converting biological knowledge graphs encoded in BEL