saramouse

saramouse's Stars

• datacarpentry/R-ecology-lesson

  Data Analysis and Visualization in R for Ecologists

  Language:R31531403507

• datacarpentry/python-ecology-lesson

  Data Analysis and Visualization in Python for Ecologists

  Language:Jupyter Notebook16325200307

• business-science/free_python_tips

  Language:HTML8013046

• bkrai/Top-10-Machine-Learning-Methods-With-R

  Includes top ten must know machine learning methods with R.

  779066

• datacarpentry/sql-ecology-lesson

  Data Management with SQL for Ecologists

  4918165144

• datacarpentry/genomics-workshop

  Genomics Workshop Overview

  46296297

• AleksandarSekulic/RFSI

  Random Forest Spatial Interpolation

  Language:R457312

• datacarpentry/spreadsheet-ecology-lesson

  Data Organization in Spreadsheets for Ecologists

  3819155140

• datacarpentry/OpenRefine-ecology-lesson

  Data Cleaning with OpenRefine for Ecologists

  2518155112

• terraref/computing-pipeline

  Pipeline to Extract Plant Phenotypes from Reference Data

  Language:Python245053213

• datacarpentry/ecology-workshop

  Ecology Workshop Overview

  20281934

• AleksandarSekulic/Rmeteo

  Spatio-temporal geostatistical mapping of meteorological data.

  Language:R17378

• bcbc-group/Botany2020NMGWorkshop

  A repo for scripts and associated files for the Botany 2020 Virtual Nonmodel Genomics Workshop

  Language:Python15103

• bensutherland/eDNA_metabarcoding

  Pipeline to analyze eDNA metabarcoding samples (PE and SE, demultiplexed, multiplexed)

  Language:R12382

• ifremer-bioinformatics/samba

  Standardized and Automated MetaBarcoding Analyses workflow (Mirror)

  Language:Nextflow12355

• danforthcenter/plantcv-v2-paper

  PlantCV image analysis scripts used in the PlantCV v2.0 paper

  Language:Jupyter Notebook10701

• iobis/PacMAN-pipeline

  Bioinformatics pipeline for the analysis of amplicon sequencing data of eDNA samples from the PacMAN project

  Language:R97631

• jblandis/AG2PI_SNP_Workshop_May2021

  Language:Shell82

• terraref/tutorials

  Learn to use TERRA REF data and software

  Language:Jupyter Notebook83115011

• emmawahl/facepai

  Scripts for executing a filtering, clustering and identification pipeline for eDNA samples.

  Language:Shell6100

• zjgold/gruinard_decon

  An eDNA metabarcoding decontamination pipeline

  Language:R5100

• AleksandarSekulic/GeoMLA

  Machine Learning algorithms for spatial and spatiotemporal data

  Language:R3000

• developing-bioinformatics/nano_edna

  Core BLAST pipeline for analysis of eDNA

  Language:R3201

• biodray/eDNA-tests

  Trying various options of eDNA pipelines

  Language:R2100

• lyy005/epps_nf

  eDNA pipeline showcase

  Language:Roff2200

• ngeraldi/eDNA_DADA2_taxonomy_pipeline

  Script used after removing primers, includes DADA2 and 2 ways of assigning taxonomy to seqeunces

  Language:R20

• peuclide/eDNA_metabarcoding_pipeline

  Language:R20

• RomuloAS/eDNA_metabarcoding_pipelines_comparison

  Language:Python2

• terraref/traits

  Species traits data

  Language:R220

• zkamvar/poppr_msn_shiny

  A shiny interface to the poppr function plot_poppr_msn.

  Language:R220