Pinned Repositories
Adversarial_attack_on_biological_sequences
This repository is for the paper "Benchmarking Machine Learning Robustness in Covid-19 Genome Sequence Classification"
Attriubute-Prediction-Code
Predicting Attribute of Nodes in a Network
Communication
App that uses Bluetooth wifi nfc band and mobile data
HDR-Project
Nanobody_Antigen
PDB_File_Analysis
PDB File analysis
PWM2Vec
Sequence_to_image_classification
Spike2Network
Spike2Vec
sarwanpasha's Repositories
sarwanpasha/Nanobody_Antigen
sarwanpasha/PDB_File_Analysis
PDB File analysis
sarwanpasha/Awesome-Hyperbolic-Learning
Paper list about hyperbolic embedding, hyperbolic models,hyperbolic applications
sarwanpasha/awesome-protein-representation-learning
Awesome Protein Representation Learning
sarwanpasha/chemicalx
A PyTorch and TorchDrug based deep learning library for drug pair scoring. (KDD 2022)
sarwanpasha/CLAPE
contrastive learning and pre-trained encoder for protein-ligand binding sites prediction
sarwanpasha/Deep-Learning-for-Clustering-in-Bioinformatics
Deep Learning-based Clustering Approaches for Bioinformatics
sarwanpasha/dgl-lifesci
Python package for graph neural networks in chemistry and biology
sarwanpasha/Drug_Analysis
sarwanpasha/Ensemble-GNN
Ensemble learning with graph neural networks for disease module discovery
sarwanpasha/esm
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
sarwanpasha/Federated-anderson-acceleration
Anderson acceleration usefulness in federated algorithms
sarwanpasha/Flu-Prediction
Predicting Future Influenza Virus Sequences with Machine Learning
sarwanpasha/gget
🧬 gget enables efficient querying of genomic reference databases
sarwanpasha/GMM-MI
Estimation of mutual information (MI) distribution with Gaussian mixture models (GMMs)
sarwanpasha/GraSSRep
sarwanpasha/kmers_compression
sarwanpasha/Long_Read_Noisy_Sequences
sarwanpasha/Non-Parametric-Approach
sarwanpasha/PCD2Vec
sarwanpasha/Poincare-Kernel
sarwanpasha/s4pred
A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
sarwanpasha/sarwanpasha.github.io
sarwanpasha/Smiles-String-Kernel
sarwanpasha/Spike2CGR
sarwanpasha/starcoder
Home of StarCoder: fine-tuning & inference!
sarwanpasha/Tabular-Deep-Learning-Library-for-PyTorch
Tabular Deep Learning Library for PyTorch
sarwanpasha/trax
Trax — Deep Learning with Clear Code and Speed
sarwanpasha/Virus2Vec
sarwanpasha/wordsCCNN
Combinatorial Convolutional Neural Networks for Words