satijalab/seurat-wrappers

Temporary Files

GischD opened this issue · 0 comments

Dear Seurat Wrappers teams,

Thank you for the effort you are making to keep this package.

I am facing the issue when I run the command RunPrestoAll(obj, assay = "RNA") consecutive times. My Seurat object was built using BPcells.
Every time I run they copy the BPcells files for the temp and after the command is run they keep the files on the temp folder. Because I am running consecutive commands my HD is getting full and my script is interrupted. Can you suggest some solution to clean these files after running the command? It Is hard to delete manually because those matrices do not have the same name I gave on BPcells files.

Thank you,
Debora