sbresnahan
PhD Candidate | Molecular, Cellular, and Integrative Biosciences | Penn State University | NSF Graduate Research Fellow | Center for Pollinator Research
@GrozingerLabState College, PA
Pinned Repositories
Galbraith-2016-PNAS-ASE-replication
Replicating the bioinformatics and statistics pipelines for allele-specific expression analysis of ovary tissue from sterile and reproductive reciprocally crossed honey bees as described in Galbraith et al. (2016). PNAS. https://www.pnas.org/content/113/4/1020
allele-specific-transcription-and-m6A
Examining the role of transcription and post-transcriptional modifications on mediating intragenomic conflict in honey bees
Dissertation-Appendix-D
Supplementary information for Chapter 5 of "Molecular Mechanisms of Phenotypic Variation in Honey Bees" - a dissertation in Molecular, Cellular, and Integrative Biosciences by Sean T. Bresnahan
IGC-CD-SM
Supplementary Materials for "Intragenomic conflict underlies extreme phenotypic plasticity in queen-worker caste determination in honey bees (Apis mellifera)"
IGC-retinue
Beyond conflict: intragenomic conflict predicts individual variation in altruistic behaviour.
localBlastTutorial
A quick tutorial for local BLAST using a custom sequence database
metacleaner
Software for automated curation of barcode sequence databases for metabarcoding and metagenomics
sbresnahan.github.io
My website
TexasCancerGenomics
Analysis of paired tumor-normal whole exome sequencing data generated in a pilot open-access study of participants in Texas.
Winter-Honeybee-Transcriptome
Analysis of summer nurse & forager and winter honey bee fat body and flight muscle transcriptomes
sbresnahan's Repositories
sbresnahan/IGC-CD-SM
Supplementary Materials for "Intragenomic conflict underlies extreme phenotypic plasticity in queen-worker caste determination in honey bees (Apis mellifera)"
sbresnahan/sbresnahan.github.io
My website
sbresnahan/Dissertation-Appendix-D
Supplementary information for Chapter 5 of "Molecular Mechanisms of Phenotypic Variation in Honey Bees" - a dissertation in Molecular, Cellular, and Integrative Biosciences by Sean T. Bresnahan
sbresnahan/metacleaner
Software for automated curation of barcode sequence databases for metabarcoding and metagenomics
sbresnahan/TexasCancerGenomics
Analysis of paired tumor-normal whole exome sequencing data generated in a pilot open-access study of participants in Texas.
sbresnahan/IGC-retinue
Beyond conflict: intragenomic conflict predicts individual variation in altruistic behaviour.
sbresnahan/localBlastTutorial
A quick tutorial for local BLAST using a custom sequence database
sbresnahan/Galbraith-2016-PNAS-ASE-replication
Replicating the bioinformatics and statistics pipelines for allele-specific expression analysis of ovary tissue from sterile and reproductive reciprocally crossed honey bees as described in Galbraith et al. (2016). PNAS. https://www.pnas.org/content/113/4/1020
sbresnahan/Winter-Honeybee-Transcriptome
Analysis of summer nurse & forager and winter honey bee fat body and flight muscle transcriptomes
sbresnahan/allele-specific-transcription-and-m6A
Examining the role of transcription and post-transcriptional modifications on mediating intragenomic conflict in honey bees