/GameteBinning_tetraploid

This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings

Primary LanguageC++MIT LicenseMIT

GameteBinning_tetraploid

Here we introduce the pipeline for gamete binning in heterozygous tetraploid genomes, a method based on single-cell sequencing of gamete genomes to achieve chromosome-level and haplotype-resolved genome assembly. This is to support the analysis in Sun_and_Jiao_et_al_2021.

Pipeline of assembly

Please check Pipeline.md