scholl-lab/vcf-filtering

Enhancement: Add Interactive CLI Prompts

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berntpopp commented

Implement interactive CLI prompts to guide users through the configuration and usage of the tool. This will make the tool more user-friendly, especially for new users.

Acceptance Criteria:

  • Implement interactive prompts for key configuration options.
  • Provide helpful tips and suggestions within the prompts.
  • Ensure that the interactive mode can be enabled or disabled via a command-line option.
  • Update the documentation to describe how to use the interactive mode.