genetics
There are 968 repositories under genetics topic.
hail-is/hail
Cloud-native genomic dataframes and batch computing
MareesAT/GWA_tutorial
A comprehensive tutorial about GWAS and PRS
trekhleb/self-parking-car-evolution
🧬 Training the car to do self-parking using a genetic algorithm
wilkox/gggenes
➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2
theislab/cellrank
CellRank: dynamics from multi-view single-cell data
intermine/intermine
A powerful open source data warehouse system
sgkit-dev/sgkit
Scalable genetics toolkit
lgmgeo/AnnotSV
Annotation and Ranking of Structural Variation
tskit-dev/msprime
Simulate genealogical trees and genomic sequence data using population genetic models
DecodeGenetics/graphtyper
Population-scale genotyping using pangenome graphs
apriha/lineage
tools for genetic genealogy and the analysis of consumer DNA test results
zhanxw/rvtests
Rare variant test software for next generation sequencing data
cmap/cmapPy
Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools
plashchynski/awesome-genetics
A curated list of awesome personal genomics software, libraries, and educational resources.
mentatpsi/OSGenome
An Open Source Web Application for Genetic Data (SNPs) using 23AndMe and Data Crawling Technologies
molgenis/molgenis
MOLGENIS - for scientific data: management, exploration, integration and analysis.
labsquare/cutevariant
A standalone and free application to explore genetics variations from VCF file
ArnovanHilten/GenNet
Framework for Interpretable Neural Networks
cx0/chatGPT-for-genetics
Chat with Open Targets genetics database leveraging text-to-graphQL capabilities of OpenAI Codex.
Griffan/VerifyBamID
VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.
hardingnj/xpclr
Code to compute the XP-CLR statistic to infer natural selection
RCollins13/HumanIdiogramLibrary
Resource of human chromosome schematics & images
ODiogoSilva/TriFusion
Streamlining phylogenomic data gathering, processing and visualization
mmkim1210/GeneticsMakie.jl
🧬High-performance genetics- and genomics-related data visualization using Makie.jl
broadinstitute/pyro-cov
Pyro models of SARS-CoV-2 variants
twoXes/awesome-structural-bioinformatics
Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.
statgen/locuszoom-standalone
Create regional association plots from GWAS or meta-analysis
gtonkinhill/fastbaps
A fast approximation to a Dirichlet Process Mixture model (DPM) for clustering genetic data
thierrygosselin/radiator
RADseq Data Exploration, Manipulation and Visualization using R
j-andrews7/Genotify
A minimal desktop app for easy and convenient gene annotation and lookup.
snap-stanford/KGWAS
KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph
BioJulia/PopGen.jl
Population Genetics in Julia
micutio/innit
A roguelike game where you play a micro organism inside a larger organism!
varfish-org/varfish-server
VarFish: comprehensive DNA variant analysis for diagnostics and research
epigen/MrBiomics
MrBiomics: Modules & Recipes augment Bioinformatics for Multi-Omics Analyses