Pinned Repositories
cdip_sequencing
chewBBACA
BSR-Based Allele Calling Algorithm
full-stack-fastapi-postgresql
Full stack, modern web application generator. Using FastAPI, PostgreSQL as database, Docker, automatic HTTPS and more.
hackseq19
hackseq 2019 - [*]-omics hackathon. Vancouver, BC
hs18
hackseq18 sidesite
hugo-theme-introduction
KrakenTools
KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files
megalinter
🦙 Mega-Linter analyzes 48 languages, 22 formats, 19 tooling formats, abusive copy-pastes and spelling mistakes in your repository sources with a GitHub Action, other CI tools or locally.
MetaMaps_docker
Dockerfile for building MetaMaps
REUSE
Rapid Elimination of Useless Sequences
schorlton's Repositories
schorlton/REUSE
Rapid Elimination of Useless Sequences
schorlton/cdip_sequencing
schorlton/chewBBACA
BSR-Based Allele Calling Algorithm
schorlton/full-stack-fastapi-postgresql
Full stack, modern web application generator. Using FastAPI, PostgreSQL as database, Docker, automatic HTTPS and more.
schorlton/hackseq19
hackseq 2019 - [*]-omics hackathon. Vancouver, BC
schorlton/hs18
hackseq18 sidesite
schorlton/hugo-theme-introduction
schorlton/KrakenTools
KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files
schorlton/megalinter
🦙 Mega-Linter analyzes 48 languages, 22 formats, 19 tooling formats, abusive copy-pastes and spelling mistakes in your repository sources with a GitHub Action, other CI tools or locally.
schorlton/MetaMaps_docker
Dockerfile for building MetaMaps
schorlton/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
schorlton/MUMandCo
MUM&Co is a simple bash script that uses Whole Genome Alignment information provided by MUMmer (only v4) to detect Structural Variation
schorlton/NCHHSTP-DTBE-Varpipe-WGS
This repository contains an analysis pipeline developed to characterize WGS output
schorlton/Porechop
adapter trimmer for Oxford Nanopore reads
schorlton/pricechecker
Price Checking App
schorlton/racon
Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads
schorlton/read-paf
Scripts for reading minimap2 PAF files
schorlton/Readhead_commentary
Scripts and Results for Readhead et al Commentary
schorlton/reprDBv2
A refined reprDB
schorlton/schorlton.github.io
schorlton/sendgrid-python
schorlton/STECFinder
Clustering and Serotyping of Shigatoxin producing E. coli (STEC) using genomic cluster specific markers
schorlton/website