This project aims to implement a console for magnetic resonance imaging (MRI) acquisitions. The central hardware components are two spectrum cards from Spectrum Instrumentation. They serve as arbitrary waveform generators (AWG) and analog to digital converter (digitizer). This application controls AWG and digitizer cards to perform MRI scans from a sequence description with the open-source pulseq framework. The console application is formerly designed for low-field applications, but might be extendable also for higher field strength.
It is recommended to install the package in a virtual environment (e.g. conda).
Further documentation on setting up miniconda can be found here.
The package was developed under Python 3.10 so it is recommended to use python==3.10
.
To install the console application, clone the repository an ensure that you are in the repository directory, which is */spectrum-console/
.
The package can be installed with different dependencies depending on the specific requirements:
`pip install -e .`
Installs all the necessary base dependencies to use the package (minimum required).
`pip install -e ".[lint]"`
Installs additional (optional) dependencies that are required to run the linter.
`pip install -e ".[test]"`
Installs additional (optional) dependencies that are required to run the linter.
`pip install -e ".[docs]"`
Installs additional (optional) dependencies that are required to build the sphinx documentation locally.
`pip install -e ".[dev]"`
Installs additional (optional) developer dependencies for profiling and developing in vs code.
Hint: Multiple dependency groups can be installed using ".[lint, test]"
for instance.
Please follow the project documentation which contains a quick-start guide, some examples and a user guide.