scottdbrown
Research Associate - Canada's Michael Smith Genome Sciences Centre, BC Cancer Immunotherapy Program
Vancouver, British Columbia
Pinned Repositories
buzzersystem
Self-hosted buzzer system for apartment buildings with only one phone number allowed per unit
self-immunopeptidome_cancer
Scripts relevant to Self-immunopeptidome and Cancer manuscript
TCR-from-RNAseq2015
Code associated with Brown, Raeburn, and Holt, Profiling tissue-resident T cell repertoires by RNA sequencing, Genome Medicine 2015
RNAseq-TcellClonality
R script for processing MiTCR-derived CDR3 data from PTCL RNA-seq
bonito
A PyTorch Basecaller for Oxford Nanopore Reads
pyensembl
Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl
minion-plasmid-consensus
Code for MinION Plasmid Sequence Verification pipeline
iPCA
stat540-tissueSpecificMethylation
Final Group Project
bcgsc-scripts
General scripts catered to the BCGSC computer systems
scottdbrown's Repositories
scottdbrown/minion-plasmid-consensus
Code for MinION Plasmid Sequence Verification pipeline
scottdbrown/host-transcriptome-epigenome-fuso
scottdbrown/seqdist
scottdbrown/buzzersystem
Self-hosted buzzer system for apartment buildings with only one phone number allowed per unit
scottdbrown/bonito
A PyTorch Basecaller for Oxford Nanopore Reads
scottdbrown/pyensembl
Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl
scottdbrown/iPCA
scottdbrown/RNAseq-TcellClonality
R script for processing MiTCR-derived CDR3 data from PTCL RNA-seq
scottdbrown/bcgsc-scripts
General scripts catered to the BCGSC computer systems
scottdbrown/self-immunopeptidome_cancer
Scripts relevant to Self-immunopeptidome and Cancer manuscript
scottdbrown/immunoPOG
immunoPOG scripts
scottdbrown/isovar_COLO829_test
scottdbrown/imdb_movies
scottdbrown/TCR-from-RNAseq2015
Code associated with Brown, Raeburn, and Holt, Profiling tissue-resident T cell repertoires by RNA sequencing, Genome Medicine 2015
scottdbrown/stat540-tissueSpecificMethylation
Final Group Project