scverse/spatialdata

Improvement to the docs

Opened this issue · 3 comments

Routinely listing improvement we can make to the docs:

  • add rasterize_bins() example in Visium HD notebook;
  • show how to use get_element_instances() in the annotation notebook.
  • make a notebook showing how to add an existing segmentation to an object; give just an introduction and refer to SOPA tutorials for more in-depth analyses
  • put a link to the spaitaldata-xenium-explorer notebook and a link to the Squidpy Xenium notebook in the xenium spaitaldata notebook

Using less and simpler datasets, tracked here #700