Pinned Repositories
alfred-workflows
Alfred Workflows for Developers
awesome
Awesome resources on Bioinformatics, data science, machine learning, programming language (Python, Golang, R, Perl) and miscellaneous stuff.
BarleyLandraces
These are the scripts used for analysis and figures in the manuscript:"Barley landraces are characterized by geographically heterogeneous genomic origins"
bcalm
de Bruijn graph compaction in low memory
Best-App
收集&推荐优秀的 Apps/硬件/技巧/周边等
bio_scripts
Practical scripts for bioinformatics
bio_tools
Useful bioinformatic scripts
biocode
Bioinformatics code libraries and scripts
TFforge
Identifying transcription factors involved in phenotypic differences between species
sea200k's Repositories
sea200k/alfred-workflows
Alfred Workflows for Developers
sea200k/BarleyLandraces
These are the scripts used for analysis and figures in the manuscript:"Barley landraces are characterized by geographically heterogeneous genomic origins"
sea200k/bcalm
de Bruijn graph compaction in low memory
sea200k/bio_scripts
Practical scripts for bioinformatics
sea200k/Bioinformatics-Training
Bioinformatics training resources
sea200k/biopython_workshop
A basic introduction to Biopython, intended for a classroom based workshop
sea200k/BLESS
sea200k/cgat
CGAT - Computational Genomics Analysis Tools
sea200k/CGATPipelines
Collection of CGAT NGS Pipelines
sea200k/Clustering_with_ANI
clustering any sequences using ANI (Average Nucleotid Identity)
sea200k/emmax_workflow
sea200k/ensembl-pipeline
Job management for the Ensembl Genebuild pipeline
sea200k/examl-tree-ancestor
pipeline stitching together fasttree, examl, and lazarus/paml for phylogenetics and ancestral sequence reconstruction
sea200k/free-programming-books
sea200k/genome_analysis
sea200k/ggtree
:christmas_tree:Visualization and annotation of phylogenetic trees
sea200k/IntroToDataScience
GitHub Repository to accompany my YouTube series of videos on Introductory Data Science using R.
sea200k/learngit
sea200k/microRNA-sequencing
Creation of a repository for microRNA-sequencing pipeline
sea200k/msmc
Implementation of the multiple sequential markovian coalescent
sea200k/ngschool2016-materials
Materials prepared by the instructors of the NGSchool2016
sea200k/ngsplot
Quick mining and visualization of NGS data by integrating genomic databases
sea200k/psmc
Implementation of the Pairwise Sequentially Markovian Coalescent (PSMC) model
sea200k/RNA-Seq-annotation-and-comparison
sea200k/SMAPdigger
sea200k/standard-RAxML
sea200k/supersmart
Self-Updating Platform for the Estimation of Rates of Speciation, Migration And Relationships of Taxa
sea200k/systemsgenetics
Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool
sea200k/transcriptome-and-genome-assembly
Scripts in this repository have been used to assemble de novo transcriptomes and genomes
sea200k/transrate
Understand your transcriptome assembly