seanaller

seanaller's Stars

• awesomedata/awesome-public-datasets

  A topic-centric list of HQ open datasets.

  60.6k9.9k

• alexryd/homebridge-shelly

  Homebridge plugin for Shelly devices

  Language:JavaScript30145

• seydx/homebridge-camera-ui

  Homebridge plugin for RTSP Cameras with HSV, motion detection support, Image Rekognition, Web UI to manage/watch streams and WebApp support

  Language:JavaScript64491

• tuxu/nbviewer-app

  A Jupyter notebook viewer for macOS

  Language:Swift75130

• seatgeek/fuzzywuzzy

  Fuzzy String Matching in Python

  Language:Python9.2k876

• knowsuchagency/klaxon

  Mac OS notifications from Python

  Language:Python745

• MTrajK/coding-problems

  Solutions for various coding/algorithmic problems and many useful resources for learning algorithms and data structures

  Language:Python3.3k613

• jenniferlu717/KrakenTools

  KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files

  Language:Python31588

• koekeishiya/yabai

  A tiling window manager for macOS based on binary space partitioning

  Language:C23.4k643

• smaegol/PlasFlow

  Software for prediction of plasmid sequences in metagenomic assemblies

  Language:Python9828

• mamba-org/mamba

  The Fast Cross-Platform Package Manager

  Language:C++6.9k353

• jhawkey/IS_mapper

  IS mapping software

  Language:Python5116

• Johngeorgesample/dhyanabar

  Übersicht system information bar

  Language:CoffeeScript5

• fbreitwieser/pavian

  🌈 Interactive analysis of metagenomics data

  Language:R38875

• arpcard/amr_curation

  A public repository for collective curation of antimicrobial resistance (AMR) genes and mutations. Submit, discuss, and resolve AMR curation issues.

  586

• Powerlevel9k/powerlevel9k

  Powerlevel9k was a tool for building a beautiful and highly functional CLI, customized for you. P9k had a substantial impact on CLI UX, and its legacy is now continued by P10k.

  Language:Shell13.5k946

• julian-heng/yabai-config

  My personal Yabai and Skhd configs and scripts.

  Language:Shell48898

• Delgan/loguru

  Python logging made (stupidly) simple

  Language:Python19.8k695

• PathoScope/PathoScope

  Pathoscope: Species identification and strain attribution with unassembled sequencing data

  Language:Python5426

• microbiome/microbiome

  microbiome R package

  Language:R28654

• adam-p/markdown-here

  Google Chrome, Firefox, and Thunderbird extension that lets you write email in Markdown and render it before sending.

  Language:JavaScript59.6k11.3k

• ranger/ranger

  A VIM-inspired filemanager for the console

  Language:Python15.5k890

• jarun/googler

  :mag: Google from the terminal

  Language:Python6.1k528

• agarrharr/awesome-cli-apps

  🖥 📊 🕹 🛠 A curated list of command line apps

  Language:Shell15.2k875

• ddarriba/jmodeltest2

  Automatically exported from code.google.com/p/jmodeltest2

  Language:Java7547

• mothur/mothur

  Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Immunology at The University of Michigan. This project seeks to develop a single piece of open-source, expandable software to fill the bioinformatics needs of the microbial ecology community.

  Language:C++261110

• audy/bioinformatics-hacks

  Scripts for miscelleneous bioinformatics tasks

  Language:Python4816

• sunbeam-labs/sunbeam

  A robust, extensible metagenomics pipeline

  Language:Python16640

• thanhleviet/ISfinder-sequences

  Insertion sequences (Insertion Element) [https://en.wikipedia.org/wiki/Insertion_sequence] collected from ISfinder (https://isfinder.biotoul.fr/)

  5915

• OSS-Lab/MetQy

  Repository for R package MetQy (read related publication here: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6247936/)

  Language:R189