seannoaa

seannoaa's Stars

• mooreryan/IdentiBin

  I don't even know what it does!

  Language:Ruby21

• ropensci/EML

  Ecological Metadata Language interface for R: synthesis and integration of heterogenous data

  Language:R9733

• VertNet/bels

  Biodiversity Enhanced Location Services

  Language:Python161

• cioos-siooc/pyobistools

  Python port of OBIS's obistools QC R package

  Language:Jupyter Notebook34

• EMODnet/EMODnetBiocheck

  Checks if IPT resources meet the OBIS guidelines

  Language:R33

• ropensci/taxize

  A taxonomic toolbelt for R

  Language:R26961

• ropensci/worrms

  World Register of Marine Species R client

  Language:R269

• iobis/dataset-edna

  eDNA dataset demonstrator

  Language:Jupyter Notebook82

• tdwg/gbwg

  Genomic Biodiversity Interest Group

  Language:Jupyter Notebook182

• iobis/pyworms

  Python client for the WoRMS REST service

  Language:Python73

• iobis/obis-qc

  OBIS QC checks

  Language:Python104

• iobis/obistools

  Tools for data enhancement and quality control

  Language:R256

• biodiversitydata-se/mol-mod

  Module for sequence-based occurrence data in Biodiversity Atlas Sweden.

  Language:Python41

• tobiasgf/lulu

  r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)

  Language:Shell6317

• jolespin/veba

  A modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metagenomes

  Language:Python778

• Geo-omics/GLAMR_omics_pipelines

  Multi-omics pipeline for the GLAMR database

  Language:Python6

• iobis/robis

  R client for the OBIS API

  Language:R3611

• tdwg/dwc

  Darwin Core standard for sharing of information about biological diversity.

  Language:Python20570

• caporaso-lab/tax-credit

  A repository for storing code and data related to a systematic comparison of short read taxonomy assignment tools

  Language:Jupyter Notebook168

• flefler/CyanoSeq

  CyanoSeq: A curated cyanobacterial 16S rRNA database for next-generation sequencing

  14

• jtamames/SqueezeMeta

  A complete pipeline for metagenomic analysis

  Language:C37980

• aomlomics/tourmaline

  Amplicon sequence processing workflow using QIIME 2 and Snakemake

  Language:Python4219

• McAllister-NOAA/REVAMP

  REVAMP: Rapid Exploration and Visualization through an Automated Metabarcoding Pipeline

  Language:R6