Pinned Repositories
Buckley_lab_protocols
Repository of protocols used by Buckley lab members. In addition to general wet-lab protocols, this repo will also contain example code and files for use with commonly used instruments and bioinformatics analysis.
Buckley_Lab_SIP_project_protocols
Buckley lab protocols for conducting SIP studies
CcycleGenomicFeatures
FullCyc2
hemp_microbiome
HR-SIP_example
Tutorials for running HR-SIP with HTSSIP package
HTSSIP
An R package for analyzing high throughput sequence stable isotope probing data
landuse_comm_assembly
Analysis code for comparing bacterial community assembly properties across land use
MetaSIPSim
MetaSIPSim: A tool for simulating metagenomic-SIP read libraries
seb369.github.io
seb369's Repositories
seb369/hemp_microbiome
seb369/FullCyc2
seb369/landuse_comm_assembly
Analysis code for comparing bacterial community assembly properties across land use
seb369/MetaSIPSim
MetaSIPSim: A tool for simulating metagenomic-SIP read libraries
seb369/Buckley_lab_protocols
Repository of protocols used by Buckley lab members. In addition to general wet-lab protocols, this repo will also contain example code and files for use with commonly used instruments and bioinformatics analysis.
seb369/Buckley_Lab_SIP_project_protocols
Buckley lab protocols for conducting SIP studies
seb369/CcycleGenomicFeatures
seb369/HR-SIP_example
Tutorials for running HR-SIP with HTSSIP package
seb369/HTSSIP
An R package for analyzing high throughput sequence stable isotope probing data
seb369/seb369.github.io
seb369/soil_phage_SIP_study
Analysis and data from a study using metagenomic-SIP to examine soil phages and carbon cycling.