Pinned Repositories
100-Days-Of-ML-Code
我的机器学习100天---100 Days of ML Coding
100-Days-Of-ML-Code-1
100-Days-Of-ML-Code中文版
2016_bray_natprot
Supporting data files, documentation, and updated tips for the Cell Painting protocol
2016_WSN_HA_analysis
流感病毒a HA 分型的相关资料Computer code for the analyses presented in "Accurate Measurement of the Effects of All Amino-Acid Mutations on Influenza Hemagglutinin" (Viruses 2016, 8(6), 155; doi:10.3390/v8060155)
20191008_stampfli_immcantation
B细胞免疫分析示范
2019_single_cell_tools
2020_DeepIS
嵌合T细胞受体Code used for "Deep-learning based three-dimensional label-free tracking and analysis of immunological synapses of chimeric antigen receptor T cells"
ABIS
grammarVAE
Code for the "Grammar Variational Autoencoder" https://arxiv.org/abs/1703.01925
scKidneyTumors
2018年肾细胞癌science文章的所有图片的R脚本Code for "Single cell transcriptomes from human kidneys reveal the cellular identity of renal tumours"
semir2's Repositories
semir2/2016_bray_natprot
Supporting data files, documentation, and updated tips for the Cell Painting protocol
semir2/2021_Haghighi_submitted
High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations
semir2/AbLang
AbLang: A language model for antibodies
semir2/Absolut
Unconstrained lattice antibody-antigen bindings generator
semir2/AccuraCode
AccuraCode® analysis pipeline
semir2/ActivePathways
多组学代谢通路富集Integrative pathway enrichment analysis of multivariate omics data
semir2/annotated_deep_learning_paper_implementations
很多深度学习论文复现相关🧑🏫 60 Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), gans(cyclegan, stylegan2, ...), 🎮 reinforcement learning (ppo, dqn), capsnet, distillation, ... 🧠
semir2/ARMT
TCGA自动分析工具
semir2/autogluon
AutoGluon: AutoML for Text, Image, and Tabular Data
semir2/BaiduPCS-Go_new20231031
iikira/BaiduPCS-Go原版基础上集成了分享链接/秒传链接转存功能
semir2/bnt162b2
Markdown version of Reverse Engineering the source code of the BioNTech/Pfizer SARS-CoV-2 Vaccine
semir2/Census
Accurate, deep, fast, and fully-automated scRNA-seq cell-type annotation
semir2/CITE-seq-Count
A tool that allows to get UMI counts from a single cell protein assay
semir2/COSGR
Accurate and fast cell marker gene identification with COSG
semir2/cTRAP
Identification of candidate causal perturbations from differential gene expression data
semir2/DeepAb
Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
semir2/deepcell-tf
Deep Learning Library for Single Cell Analysis
semir2/DPKS
Data Processing Kitchen Sink for proteomics data
semir2/draw.io
semir2/EC_YG638_Circos
script for Circos plot
semir2/escape
Easy single cell analysis platform for enrichment
semir2/GSEApy
Gene Set Enrichment Analysis in Python
semir2/immuneREF
semir2/ldsc
LD Score Regression (LDSC)
semir2/manuscript-rep-phad
Scripts to process 10X BCR data and create an AIRR input file (to upload into RepSeq platform)
semir2/MEM-examples
Marker Enrichment Modeling (MEM)
semir2/neural-profiling
semir2/Platypus
R package for the analysis of single-cell immune repertoires
semir2/thermonucleotideBLAST
Searching DNA/RNA sequence databases with PCR and/or probe queries
semir2/unilm
Large-scale Self-supervised Pre-training Across Tasks, Languages, and Modalities