remove `--justmp` requirement from `--stdout`
jaredo opened this issue · 1 comments
jaredo commented
Currently nxtrim requires the --justmp flag to be used with --stdout and will pipe both mp/unknown reads to stdout. This is inconsistent when the --just-mp is used by itself (mp and unknown go to separate files). Users should be able to provide --stdout by itself and the current behaviour will be maintained.
As discussed in #18