Pinned Repositories
FluUtils
assorted flu utils
GlycoMadness
assorted scripts and data for Gilmore's lab glyco-project
HaploLimit
Alleles and linkage information to estimate range of compatible haplotypes
OSXHostsPerUser
/etc/hosts modified per user login for OSX
peaktools
tools for BEDPE-style peaks
Thermal_adapt_scripts
Scripts to pull and analyze thermal adaptation data for prokaryotes.
sergpolly's Repositories
sergpolly/peaktools
tools for BEDPE-style peaks
sergpolly/Thermal_adapt_scripts
Scripts to pull and analyze thermal adaptation data for prokaryotes.
sergpolly/GlycoMadness
assorted scripts and data for Gilmore's lab glyco-project
sergpolly/bioframe
Pandas utilities for tab-delimited and other genomic data files
sergpolly/cLIMS-docker
cLIMS repository running on Docker Contaienrs
sergpolly/clodius
Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.
sergpolly/cooler_dig_not_bug
digging into cooler
sergpolly/cooloop
experimental/development version of the dot-finder
sergpolly/cooltools
The tools for your .cool's
sergpolly/ct_figures
sergpolly/CV
just a CV
sergpolly/cworld-dekker
perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)
sergpolly/DNAscent
Software for detecting regions of BrdU and EdU incorporation in Oxford Nanopore reads.
sergpolly/docker-pure-ftpd
Docker Pure-ftpd Server
sergpolly/EMPIRIC-HA
Scripts for analysis of EMPIRIC experiment on the HA signal peptide.
sergpolly/galeprot
GPU accelerated lattice protein folding
sergpolly/higlass
Fast large scale matrix visualization for the web.
sergpolly/micro-image-test
play with image convolution
sergpolly/model_play
playing with modeling
sergpolly/negspy
Python NGS Repository
sergpolly/npcuda-example
Example python (numpy) -- CUDA installable package with a C-extension library
sergpolly/octopass
🐙 Management linux user and authentication with team or collaborator on Github.
sergpolly/oe-tileset-example
a small example of on-the-fly observed/expected in HiGlass
sergpolly/personal-ansible-config
Personal ansible config for setting up workstations/laptops
sergpolly/puzzle_js_kolya
play around with web (JS/html/css) to make a stupid arithmetic puzzle generator
sergpolly/random-nextflow-utils
just trying to apply nextflow to some low-level data-management
sergpolly/randomnotes
just some random notes
sergpolly/sergpolly.github.io
personal page / blog / lab journal
sergpolly/sergpolly_cv
cv
sergpolly/test-chunk-hdf5
test different scenarios on writing/reading a big hdf5 using pandas