sfu-compbio

Simon Fraser UniversityBurnaby, Canada

Pinned Repositories

citup
Clonality Inference in Multiple Tumor Samples using Phylogeny
Language:C++13 5 34
colormap
Language:C++16 6 102
compression-benchmark
Language:Python22 6 14
compression-benchmark-tools
Language:Python6 7 02
cypiripi
A tool for finding out the CYP2D6/CYP2D7 genotypes in the HTS reads
Language:C++6 3 13
deez
DeeNA Zip (SAM/BAM compression tool)
Language:C++13 5 14
mrsfast
mrsFAST: micro-read substitution-only Fast Alignment Search Tool
Language:C28 3 147
PhISCS
Tumor Phylogeny Reconstruction via Integrative use of Single Cell and Bulk Sequencing Data
Language:Python11 4 03
scalce
FASTQ compression via boosting Sequence Compression Algorithms using Locally Consistent Encoding
Language:C++13 7 74
sinvict
SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA
Language:C++27 5 158

sfu-compbio/mrsfast
mrsFAST: micro-read substitution-only Fast Alignment Search Tool
Language:C28 3 147
sfu-compbio/sinvict
SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA
Language:C++27 5 158
sfu-compbio/compression-benchmark
Language:Python22 6 14
sfu-compbio/colormap
Language:C++16 6 102
sfu-compbio/citup
Clonality Inference in Multiple Tumor Samples using Phylogeny
Language:C++13 5 34
sfu-compbio/deez
DeeNA Zip (SAM/BAM compression tool)
Language:C++13 5 14
sfu-compbio/scalce
FASTQ compression via boosting Sequence Compression Algorithms using Locally Consistent Encoding
Language:C++13 7 74
sfu-compbio/PhISCS
Tumor Phylogeny Reconstruction via Integrative use of Single Cell and Bulk Sequencing Data
Language:Python11 4 03
sfu-compbio/compression-benchmark-tools
Language:Python6 7 02
sfu-compbio/cypiripi
A tool for finding out the CYP2D6/CYP2D7 genotypes in the HTS reads
Language:C++6 3 13
sfu-compbio/compression-benchmark-data
Language:Python3 6 01
sfu-compbio/hitndrive
Language:C++2 4 02
sfu-compbio/cliiq
Accurate Comparative Detection and Quantification of Expressed Isoforms in a Population
1 4 0
sfu-compbio/orman
Optimal Resolution of Ambiguous RNA-Seq Multi-mappings in the Presence of Novel Isoforms
Language:C++1 5 01
sfu-compbio/pacfast
Language:CSS1 2 0
sfu-compbio/ctpsingle
Language:Python3 03
sfu-compbio/utils
Language:C++4 0