Pinned Repositories
GeneBurden
From minimac4 BCF/VCF.gz input create a gene burden VCF.gz file
Genetic-Variant-Prioritization-using-Elastic-Net
See Gagliano SA, Barnes MR, Weale ME, Knight J (2014) A Bayesian method to incorporate hundreds of functional characteristics with association evidence to improve variant prioritization. PLoS ONE
GWAS_Practical
Quality control and association analysis for a genome-wide association study using PLINK
Predictive-Accuracy
Predictive-Accuracy-Measures-R-code
PRS
Protocol for Polygenic Risk Score set-up
sgagliano.github.io
My website
SumHer-scripts
Tractor
UKB_WES_vs_TOPMed_IMP
Comparison of genotypes for UK Biobank WES on 50K participants to TOPMed-imputed data
useful_code_for_genetic_analysis
Simple unix commands and more
sgagliano's Repositories
sgagliano/GeneBurden
From minimac4 BCF/VCF.gz input create a gene burden VCF.gz file
sgagliano/useful_code_for_genetic_analysis
Simple unix commands and more
sgagliano/UKB_WES_vs_TOPMed_IMP
Comparison of genotypes for UK Biobank WES on 50K participants to TOPMed-imputed data
sgagliano/Genetic-Variant-Prioritization-using-Elastic-Net
See Gagliano SA, Barnes MR, Weale ME, Knight J (2014) A Bayesian method to incorporate hundreds of functional characteristics with association evidence to improve variant prioritization. PLoS ONE
sgagliano/PRS
Protocol for Polygenic Risk Score set-up
sgagliano/GWAS_Practical
Quality control and association analysis for a genome-wide association study using PLINK
sgagliano/Predictive-Accuracy
Predictive-Accuracy-Measures-R-code
sgagliano/sgagliano.github.io
My website
sgagliano/SumHer-scripts
sgagliano/Tractor