/Dicom-Viewer-MedSAM

Primary LanguagePythonMIT LicenseMIT

Dicom Viewer

DicomViewer GUI (Dicom Viewer)

3D Dicom Viewer


Main Window

스크린샷 2024-05-31 오후 9 49 48

3D processing

포함하는 기능은 다음과 같습니다.

  • Load DICOM stack
  • Save slice (axial, sagittal, coronal)
  • Colormap transform
  • Slider scrolling
  • Mouse hovering/clicking
  • Show DICOM info
  • Show slice index coordinate
  • 3D volume reconstruction

스크린샷 2024-05-31 오후 9 38 54

How to use it?

Project root will be /src, just clone it and run mainwindow.py.

Load Checkpoint in work_dir/LiteMedSAM

base checkpoint(from bowang-lab/MedSAM) https://drive.google.com/drive/folders/1ETWmi4AiniJeWOt6HAsYgTjYv_fkgzoN checkpoint 저장 Fine Tuned Checkpoint (https://drive.google.com/drive/folders/1h0RgLM06RTMNbeLLVMD5opFw4kuaFNnG?usp=drive_link)

Strictly follow the package version in requirements.txt is not necessary.

Acknowledgments

INFINITT HealthCare (2024)
SNU CREATIVE INTEGRATED DESIGN 2 (2024), Hana Oh, Jimin Seo, Jahyun Yun