shabeir

shabeir's Stars

• franknoe/mldl-md-dynamics

  A repository of update in molecular dynamics field by recent progress in machine learning and deep learning.

  132

• codesrivastavalab/tSNE-IDPClustering

  Language:Python92

• BradyAJohnston/MolecularNodes

  Toolbox for molecular animations in Blender, powered by Geometry Nodes.

  Language:Python88883

• paulrobustelli/CHEM101.6

  Language:Jupyter Notebook12328

• Peldom/papers_for_protein_design_using_DL

  List of papers about Proteins Design using Deep Learning

  1.4k171

• chemdrv/python-for-pchem

  Jupyter notebooks and related files for integrating Python into physical chemistry labs

  Language:Jupyter Notebook71

• fimrie/DeLinker

  Language:Python3645

• bio-phys/MemCurv

  Software to characterize membrane shape and curvature

  Language:Python61

• mnmelo/fluxer

  A script for counting crossing events across a finite width xy-plane membrane.

  Language:Python42

• psa-lab/SimSite3D

  The SimSite3D Software tools are designed to quickly search a database of three dimensional structures, in Protein Data Bank format, with protein-ligand binding sites to determine which binding sites in the database have steric and chemical similarities to the query binding site.

  Language:GLSL112

• bokeh/bokeh

  Interactive Data Visualization in the browser, from Python

  Language:TypeScript19.3k4.2k

• nservant/nf-core-hic

  Analysis of Chromosome Conformation Capture data (Hi-C). Main fork @

  Language:Python52

• gletreut/gem_reconstruction

  Scripts aimed at reconstructing a polymer model of the chromosome from conformation capture datasets.

  Language:C++1

• BDM-Lab/MOGEN

  The software for modeling the 3D structure of a genome using Hi-C chromosome conformation capturing data

  Language:Java83

• PPiMapBuilder/PPiMapBuilder

  Cytoscape 3.0 app. Generation of protein-protein interaction network with prediction using protein orthology

  Language:Java94

• aqlaboratory/proteinnet

  Standardized data set for machine learning of protein structure

  Language:Python855131

• binglansky/spider

  一些小爬虫 : )

  Language:Python6141

• programming-life/programming-life-2013

  Gigabase: Synthetic Biology Cell Modeling Project

  Language:JavaScript188

• 20n/act

  Computational synthetic biology: Predicting DNA edits for bioengineering

  Language:Java8126

• Synbiota/GENtle2

  GENtle2 - Web-Based DNA Editor for Synthetic Biology

  Language:JavaScript10037