🦀 a simple program for vcf/bcf file manipulation
git clone https://github.com/sharkLoc/vcfkit.git
cd vcfkit
cargo b --release
# mv target/release/vcfkit to anywhere you want
vcfkit --help
vcfkit: a simple program for vcf/bcf file manipulation
repo: https::github.com/sharkLoc/vcfkit.git
email: dwood8146@gmail.com
Usage: vcfkit <COMMAND>
Commands:
concat
concatenate VCF/BCF files from the same set of samples
convert
convert BCF file to VCF file formats
select
select SNP/INDEL variants from a VCF file
split
split vcf file by chromosome name
stats
statistics including alleles frequence, missing rate, etc
help
Print this message or the help of the given subcommand(s)
Options:
-h, --help
Print help (see a summary with '-h')
-V, --version
Print version
** any bugs please report issues **