shaziaruybal
Postdoctoral research fellow in genetic/genomic epidemiology and surveillance of malaria and other vector-borne diseases
@mrc-ide, Imperial College LondonLondon, UK
Pinned Repositories
PGEforge
A community-driven resource for enhancing Plasmodium genomic epidemiology analysis
SIMPLEGEN
Simulating Plasmodium Epidemiological and Genetic Data
automate-cv-rmd
Automate your CV - easy as 1, 2, knit! A workshop to get from data to professional CV using R Markdown presented at R-Ladies Melbourne
covidClassifyR
The source code for the covidClassifyR Shiny web application, which streamlines the data processing of Luminex-based SARS-CoV-2 serological data to classify recent exposure to COVID-19
covidClassifyR-workshop
A four-day workshop on how to use the covidClassifyR Shiny web application, designed for Papua New Guinea Institute of Medical Research researchers
covidClassifyR_useR2022
Slides for a useR! 2022 conference talk on covidClassifyR: a Shiny app to streamline data analysis pipelines to enhance the monitoring of COVID-19 in Papua New Guinea
cv
CV built with R Markdown and the vitae package
dashboard-mundialFIFA
"Crea tu dashboard en R: Visualizando Datos del Mundial FIFA 1930-2018" Un taller para aprender a crear dashboards con R impartido en el Brown Bag Seminar del Laboratorio de Innovacion en Salud, UPCH
DRpower_app
This tool is designed to help researchers conducting Plasmodium pfhrp2/3 gene deletion studies, it uses the DRpower package (mrc-ide.github.io/DRpower) in the backend for simulations
website-apero
Archive of personal website using blogdown + Hugo Apero theme
shaziaruybal's Repositories
shaziaruybal/automate-cv-rmd
Automate your CV - easy as 1, 2, knit! A workshop to get from data to professional CV using R Markdown presented at R-Ladies Melbourne
shaziaruybal/cv
CV built with R Markdown and the vitae package
shaziaruybal/covidClassifyR
The source code for the covidClassifyR Shiny web application, which streamlines the data processing of Luminex-based SARS-CoV-2 serological data to classify recent exposure to COVID-19
shaziaruybal/website-apero
Archive of personal website using blogdown + Hugo Apero theme
shaziaruybal/dashboard-mundialFIFA
"Crea tu dashboard en R: Visualizando Datos del Mundial FIFA 1930-2018" Un taller para aprender a crear dashboards con R impartido en el Brown Bag Seminar del Laboratorio de Innovacion en Salud, UPCH
shaziaruybal/covidClassifyR-workshop
A four-day workshop on how to use the covidClassifyR Shiny web application, designed for Papua New Guinea Institute of Medical Research researchers
shaziaruybal/covidClassifyR_useR2022
Slides for a useR! 2022 conference talk on covidClassifyR: a Shiny app to streamline data analysis pipelines to enhance the monitoring of COVID-19 in Papua New Guinea
shaziaruybal/2022-05-04-It-takes-a-spark
Materials for the Disease Detectives R-Ladies Melbourne workshop prepared for It Takes a Spark Conference for high school students and teachers in STEM
shaziaruybal/AMMS2022
This repository holds all of the code for the Applied Malaria Molecular Surveillance (AMMS) 2022 workshop, held at the EPHI in Addis Ababa, 5-7 August 2022.
shaziaruybal/application-appliedepi
shaziaruybal/distill-website
shaziaruybal/DRpower_app
This tool is designed to help researchers conducting Plasmodium pfhrp2/3 gene deletion studies, it uses the DRpower package (mrc-ide.github.io/DRpower) in the backend for simulations
shaziaruybal/drjacoby_training
Holds the material (scripts, lectures etc) for the training workshop on drjacoby
shaziaruybal/ghana-var-age-immunity
Analysis code and source data for the publication "Age-specific patterns of DBLα var diversity can explain why residents of high malaria transmission areas remain susceptible to Plasmodium falciparum blood stage infection throughout life" published in International Journal for Parasitology
shaziaruybal/Intro_to_Stan
shaziaruybal/iyo
shaziaruybal/iyo-distill
shaziaruybal/mlgh_numpyro
shaziaruybal/prob-epi
Course materials of "Bayesian Modelling and Probabilistic Programming" with NumPyro, initially created for "AI for Science" MSc at African Institute for Mathematical Sciences (AIMS)
shaziaruybal/R03-alphascreen-analysis
Analysis code and source data for the manuscript " Identification of novel Plasmodium vivax proteins associated with protection against clinical malaria"
shaziaruybal/RLadiesMelbInc_AnnualReport_2021-2022
Annual report for R-Ladies Melbourne Inc 2021-2022
shaziaruybal/rstudioglobal2021-divscholar-recap
Slides for an R-Ladies Melbourne talk on the rstudio::global(2021) Diversity Scholar workshops
shaziaruybal/shaziaruybal
shaziaruybal/shaziaruybal.github.io
shaziaruybal/shiny_dide
:star2::hospital::star2: DIDE shiny server configuration
shaziaruybal/SLiM-review
shaziaruybal/tidytuesday
shaziaruybal/varcode-ecuador
This repository stores the data and code for the manuscript entitled "Molecular epidemiology of continued Plasmodium falciparum disease transmission after an outbreak in Ecuador" by Ruybal-Pesántez et al
shaziaruybal/website
Archive of personal website with Hugo Academic theme
shaziaruybal/website-quarto
Personal website using Quarto