Pinned Repositories
genepheno
this repository contains text mined gene-phenotype data
padimi
pathophenodb
Web application and additional content for PathoPhenoDB
STARVar
STARVar:Symptom based Tool for Automatic Ranking of Variants using evidence from literature and genomes
projects-2023
association_score_methods
Descriptions of association score methods
CellNomenclatureStudy
This pipleine annotates open access full text articles (dictionary based approach)
Europe-PMC-Section-Tagger
This is a text mining tool which categorizes different sections of a given XML full text document into 17 different pre-defined sections (Introduction & Background, Materials & Methods, Discussion, Conclusion & Future Work, Case Study, Acknowledgement & Funding, Author Contribution, Competing Interest, Supplementary Data, Abbreviations, Key words, References, Appendix, Figures, Tables, Other)
pavs_annotation
spec
Scholarly HTML specification
shenay's Repositories
shenay/CellNomenclatureStudy
This pipleine annotates open access full text articles (dictionary based approach)
shenay/association_score_methods
Descriptions of association score methods
shenay/Europe-PMC-Section-Tagger
This is a text mining tool which categorizes different sections of a given XML full text document into 17 different pre-defined sections (Introduction & Background, Materials & Methods, Discussion, Conclusion & Future Work, Case Study, Acknowledgement & Funding, Author Contribution, Competing Interest, Supplementary Data, Abbreviations, Key words, References, Appendix, Figures, Tables, Other)
shenay/pavs_annotation
shenay/spec
Scholarly HTML specification