Pinned Repositories
annotation-tools
tools to allow annotation of vcf and maf files from a number of centers and merging the results
cbioportal
The cBioPortal for Cancer Genomics
cbioportal-core
Legacy cBioPortal Core
cbioportal-frontend
React Frontend of cBioPortal :tada:
cBioPortal-new-study-assistant
A tool to help match attributes in a new study to attributes in existing studies on the cBioPortal
clinical-data-dictionary
Clinical Attribute Web Service for retrieving clinical attribute names and metadata.
clinical-data-normalization
Tools and data relating to clinical data normalization efforts.
cmo-pipelines
code-examples
publicly accessible code examples to discuss
dataEngTraining_MSK
sheridancbio's Repositories
sheridancbio/annotation-tools
tools to allow annotation of vcf and maf files from a number of centers and merging the results
sheridancbio/cbioportal
The cBioPortal for Cancer Genomics
sheridancbio/cbioportal-core
Legacy cBioPortal Core
sheridancbio/cbioportal-frontend
React Frontend of cBioPortal :tada:
sheridancbio/cBioPortal-new-study-assistant
A tool to help match attributes in a new study to attributes in existing studies on the cBioPortal
sheridancbio/clinical-data-dictionary
Clinical Attribute Web Service for retrieving clinical attribute names and metadata.
sheridancbio/clinical-data-normalization
Tools and data relating to clinical data normalization efforts.
sheridancbio/cmo-pipelines
sheridancbio/code-examples
publicly accessible code examples to discuss
sheridancbio/dataEngTraining_MSK
sheridancbio/datahub
A centralized location for storing curated data ready for inclusion in cBioPortal.
sheridancbio/genome-nexus
Interpreting cancer genomics data š§¬
sheridancbio/genome-nexus-annotation-pipeline
Library and tool for annotating MAF files using Genome Nexus Webserver API
sheridancbio/genome-nexus-java-api-client
Java API Client for Genome Nexus
sheridancbio/genome-nexus-vep
sheridancbio/go-mpath-proto
sheridancbio/go-sort-demo
graphical demonstration of parallel running sort routines
sheridancbio/knowledgesystems-k8s-deployment
Documentation and configuration files for deploying the Knowledge Systems Group's services using kubernetes
sheridancbio/nats.go
Golang client for NATS, the cloud native messaging system.
sheridancbio/oncokb-annotator
Annotates variants in MAF with OncoKB annotation.
sheridancbio/oncotree
sheridancbio/oncotree-transformer
sheridancbio/pdb-annotation
sheridancbio/Spring-Basic-RESTful-Web-Service
sheridancbio/SpringBootOAuth2
sheridancbio/vcf2maf
Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms